BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C02SP1|AL425998
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig261 591 e-169
>3x_Contig261
Length = 1087
Score = 591 bits (298), Expect = e-169
Identities = 322/328 (98%), Gaps = 2/328 (0%)
Strand = Plus / Plus
Query: 480 accgaggtaaaaacaacctc-gagagtcagaagcggaaattaatatgcgccccctgamaa 538
||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| ||
Sbjct: 187 accgaggaaaaaacaacctgtgagagacagaagcggaaattaatatgcgccccctgaaaa 246
Query: 539 atgagaacgggaagcaaatccaagatttttatctcaagacctcttttttttttgtgtctg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atgagaacgggaagcaaatccaagatttttatctcaagacctcttttttttttgtgtctg 306
Query: 599 tgccac-aaaaacatacggagtctctgacagctggaaagacaggtccattattttgtagt 657
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgccaccaaaaacatacggagtctctgacagctggaaagacaggtccattattttgtagt 366
Query: 658 agtaaaagcacatccttagcctgattcgagtaagttgtttctgaagtaagttttgtatgg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agtaaaagcacatccttagcctgattcgagtaagttgtttctgaagtaagttttgtatgg 426
Query: 718 gaagttaacgtttctaaggaaaaaaaaggaaatcttttatatacagcaacgcctcacagc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gaagttaacgtttctaaggaaaaaaaaggaaatcttttatatacagcaacgcctcacagc 486
Query: 778 cagtgctgggcgtatcaacggctattga 805
||||||||||||||||||||||||||||
Sbjct: 487 cagtgctgggcgtatcaacggctattga 514
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6835
Number of Sequences: 1807
Number of extensions: 6835
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)